BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G04SP1|AL430431
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1663 0.0
>3x_Contig1801
Length = 57606
Score = 1663 bits (834), Expect = 0.0
Identities = 859/870 (98%), Gaps = 2/870 (0%)
Strand = Plus / Minus
Query: 1 gatcagcagtaatatcagcgccatcttcagatggtaccgttactttttcttgtgctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2961 gatcagcagtaatatcagcgccatcttcagatggtaccgttactttttcttgtgctggag 2902
Query: 61 tktcatctggaattactacgagttctgattcccaagtgtaagasttggatatatttmmmt 120
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 2901 tgtcatctggaattactacgagttctgattcccaagtgtaagagttggatatatttaaat 2842
Query: 121 gcgga-cttcggcaggtaactcatcggatggtgcttccttagctggattccataccggtg 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 gcggagcttcggcaggtaactcatcggatggtgcttccttagctggattccataccggtg 2782
Query: 180 taggttttacatcttccaaatcgatgtctgacaaatctacgtccttcacaccgcgacata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 taggttttacatcttccaaatcgatgtctgacaaatctacgtccttcacaccgcgacata 2722
Query: 240 tgtggtcaatgtcaatatcaagttcggactggaaatattcatgacatagttccatgtaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2721 tgtggtcaatgtcaatatcaagttcggactggaaatattcatgacatagttccatgtaca 2662
Query: 300 atgaccaccattggttcctatatttmtcgttgtattgaccaccagttgacccatgcttcc 359
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2661 atgaccaccattggttcctatatttatcgttgtattgaccaccagttgacccatgcttcc 2602
Query: 360 atggcttgtttttaccgatgaaatggaccaactttagcttgttggcaaaaaacttgatag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 atggcttgtttttaccgatgaaatggaccaactttagcttgttggcaaaaaacttgatag 2542
Query: 420 ctggagagtattgatatccagcgttaggagacgtcacgttgtagaaaamaggtaatctga 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2541 ctggagagtattgatatccagcgttaggagacgtcacgttgtagaaaaaaggtaatctga 2482
Query: 480 tccactccgtcagtctatccccatcgtgacacatagggttgamaaattggttcaagatcc 539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2481 tccactccgtcagtctatccccatcgtgacacatagggttgaaaaattggttcaagatcc 2422
Query: 540 cttggtccgcaccatctatagataattcttttgttgccaattcgtgcaattcctggtact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 cttggtccgcaccatctatagataattcttttgttgccaattcgtgcaattcctggtact 2362
Query: 600 tttccttactgggcttaatgaccattacaccactgttgaacaaatcgggccagccacaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 tttccttactgggcttaatgaccattacaccactgttgaacaaatcgggccagccacaat 2302
Query: 660 ctggtacagcagccatttgatcgctggtttgattggaaacatgatcaaaaattttgaata 719
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 ctggtacagcagcaatttgatcgctggtttgattggaaacatgatcaaaaattttgaata 2242
Query: 720 tatctgaatcaaggggtagcacatcactatcaaggtacagaactttctcatattgtgtc- 778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 tatctgaatcaaggggtagcacatcactatcaaggtacagaactttctcatattgtgtca 2182
Query: 779 actcccataaatgtaatttcataaatgtgaacgctaactctgatcgattctccaacatca 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 actcccataaatgtaatttcataaatgtgaacgctaactctgatcgattctccaacatca 2122
Query: 839 taaggttcacttggttttgtcttatgaccg 868
||||||||||||||||||||||||||||||
Sbjct: 2121 taaggttcacttggttttgtcttatgaccg 2092
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5479
Number of Sequences: 1807
Number of extensions: 5479
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)